Build an interactive dashboard to explore the Belly Button Biodiversity dataset, which catalogs the microbes that colonize human navels. The dataset reveals that a small handful of microbial species...

DashboardAssignment/app.js
var option = "";
var data_set ;
function init() {
    //D3 library to read in samples.json
    d3.json("samples.json").then(function(data){
data_set = data;
console.log(data_set);

DisplayMetaData(940,data_set);
DisplayHorizontalBarChart(940,data_set);
DisplayBubbleChart(940,data_set);
var OptionsMenu = d3.select("#selDataset");
data.names.forEach(function(name){
OptionsMenu.append("option").text(name);
});
})
}
function unpack(rows, index) {
return rows.map(function(row) {
return row[index];
});
}
function optionChanged(value) {
option = value;
DisplayMetaData(option,data_set);
DisplayHorizontalBarChart(option,data_set);
DisplayBubbleChart(option,data_set);
}
//4. function used to display the sample metadata, i.e., an individual's demographic information.
function DisplayMetaData(option,data_set) {


var mtdata = data_set.metadata.filter(row => row.id == option);
d3.select("#sample-metadata").html(displayObject(mtdata[0]));

}
//5.Function to display each key-value pair from the metadata JSON object somewhere on the page.
function displayObject(obj) {
var str = "";
Object.entries(obj).forEach(([key,value]) => {
str += `
${key}:${value}
`;
if(key=="wfreq"){
buildGauge(value);
console.log("gauge value is:" +value);
}

});
return str;
}
//2. function to display bar chart with a dropdown menu to display the top 10 OTUs found in that individual.
function DisplayHorizontalBarChart(option,data_set) {

var bar_data = data_set.samples.filter(sample => sample.id == option);
console.log(bar_data);
    //using otu_ids as the labels for the bar chart
var y = bar_data.map(row =>row.otu_ids);
var y1 =[];
for(i=0;i y1.push(`OTU ${y[0][i]}`);
}
var x = bar_data.map(row =>(row.sample_values));
var text = bar_data.map(row =>row.otu_labels);

var trace = {
x:x[0].slice(0,10),
y:y1.slice(0,10),
text:text[0].slice(0,10),
        //type of chart - bar
type:"bar",
        //orientation of the barchart - horizontal
orientation:"h",

};
var data = [trace];
var layout = {
yaxis: {
autorange: "reversed"
}
}
Plotly.newPlot("bar",data,layout);
}
//3. Function to create a bubble chart that displays each sample
function DisplayBubbleChart(option,data_set) {
var bar_data = data_set.samples.filter(sample => sample.id == option);
console.log(bar_data);
    //3.1 Using otu_ids for the x values
var x = bar_data.map(row =>row.otu_ids);
    //3.2 Using sample_values for the y values
var y = bar_data.map(row =>row.sample_values);
    //3.3 Using sample_values for the marker size
var marker_size = bar_data.map(row =>row.sample_values);
    //3.4 Using otu_ids for the marker colors
    var marker_color = bar_data.map(row =>row.otu_ids);
    //3.5 Using otu_labels for the text values
var text = bar_data.map(row =>row.otu_labels);

console.log(x[0]);
console.log(y[0]);
console.log(text);

var trace1 = {
x:x[0],
y:y[0],
text: text[0],
mode:"markers",
marker: {
color: marker_color[0],
size: marker_size[0]
}
};
var data = [trace1];
var layout = {
xaxis:{
title: "OTU ID"
}
};
Plotly.newPlot("bubble",data,layout);
}
init();
DashboardAssignment/BubbleChart.png
DashboardAssignment/Dashboard_part1.jpg
DashboardAssignment/Dashboard_part2.png
DashboardAssignment/DemographicInfo.png
DashboardAssignment/Drop_Down.png
DashboardAssignment/HorizontalBarGraph.png
DashboardAssignment/index.html



Belly Button Biodiversity Dashboard
Use the interactive charts below to explore the dataset



Test Subject ID No.:


Demographic Info










DashboardAssignment/samples.json
{
"names":["940", "941", "943", "944", "945", "946", "947", "948", "949", "950", "952", "953", "954", "955", "956", "958", "959", "960", "961", "962", "963", "964", "966", "967", "968", "969", "970", "971", "972", "973", "974", "975", "978", "1233", "1234", "1235", "1236", "1237", "1238", "1242", "1243", "1246", "1253", "1254", "1258", "1259", "1260", "1264", "1265", "1273", "1275", "1276", "1277", "1278", "1279", "1280", "1281", "1282", "1283", "1284", "1285", "1286", "1287", "1288", "1289", "1290", "1291", "1292", "1293", "1294", "1295", "1296", "1297", "1298", "1308", "1309", "1310", "1374", "1415", "1439", "1441", "1443", "1486", "1487", "1489", "1490", "1491", "1494", "1495", "1497", "1499", "1500", "1501", "1502", "1503", "1504", "1505", "1506", "1507", "1508", "1510", "1511", "1512", "1513", "1514", "1515", "1516", "1517", "1518", "1519", "1521", "1524", "1526", "1527", "1530", "1531", "1532", "1533", "1534", "1535", "1536", "1537", "1539", "1540", "1541", "1542", "1543", "1544", "1545", "1546", "1547", "1548", "1549", "1550", "1551", "1552", "1553", "1554", "1555", "1556", "1557", "1558", "1561", "1562", "1563", "1564", "1572", "1573", "1574", "1576", "1577", "1581", "1601"],
"metadata":[{"id": 940, "ethnicity": "Caucasian", "gender": "F", "age": 24.0, "location": "Beaufort/NC", "bbtype": "I", "wfreq": 2.0}, {"id": 941, "ethnicity": "Caucasian/Midleastern", "gender": "F", "age": 34.0, "location": "Chicago/IL", "bbtype": "I", "wfreq": 1.0}, {"id": 943, "ethnicity": "Caucasian", "gender": "F", "age": 49.0, "location": "Omaha/NE", "bbtype": "I", "wfreq": 1.0}, {"id": 944, "ethnicity": "European", "gender": "M", "age": 44.0, "location": "NewHaven/CT", "bbtype": "I", "wfreq": 1.0}, {"id": 945, "ethnicity": "Caucasian", "gender": "F", "age": 48.0, "location": "Philidelphia/PA", "bbtype": "I", "wfreq": 1.0}, {"id": 946, "ethnicity": "Caucasian", "gender": "F", "age": 42.0, "location": "Deerfield/MA", "bbtype": "I", "wfreq": 3.0}, {"id": 947, "ethnicity": "Caucasian", "gender": "M", "age": 49.0, "location": "ChapelHill/NC", "bbtype": "I", "wfreq": 6.0}, {"id": 948, "ethnicity": "Caucasian", "gender": "M", "age": 20.0, "location": "ChapelHill/NC", "bbtype": "I", "wfreq": null}, {"id": 949, "ethnicity": "Caucasian", "gender": "F", "age": 51.0, "location": "Durham/NC", "bbtype": "I", "wfreq": 3.0}, {"id": 950, "ethnicity": "Caucasian", "gender": "M", "age": 51.0, "location": "NewYork/NY", "bbtype": "I", "wfreq": 5.0}, {"id": 952, "ethnicity": "Caucasian", "gender": "F", "age": 51.0, "location": "Seattle/WA", "bbtype": "I", "wfreq": 7.0}, {"id": 953, "ethnicity": "Caucasian", "gender": "F", "age": 38.0, "location": "Chicago/IL", "bbtype": "I", "wfreq": 2.0}, {"id": 954, "ethnicity": "Caucasian", "gender": "M", "age": 26.0, "location": "NewYork/NY", "bbtype": "I", "wfreq": 7.0}, {"id": 955, "ethnicity": "Caucasian", "gender": "F", "age": 27.0, "location": "NewYork/NY", "bbtype": "I", "wfreq": 7.0}, {"id": 956, "ethnicity": "Caucasian", "gender": "M", "age": 16.0, "location": "Jacksonville/NC", "bbtype": "I", "wfreq": 7.0}, {"id": 958, "ethnicity": "Caucasian", "gender": "M", "age": 43.0, "location": "Wilmington/NC", "bbtype": "I", "wfreq": 5.0}, {"id": 959, "ethnicity": "Caucasian", "gender": "M", "age": 40.0, "location": "Carrboro/NC", "bbtype": "I", "wfreq": 5.0}, {"id": 960, "ethnicity": "Caucasian", "gender": "M", "age": 48.0, "location": "Lexington/NC", "bbtype": "I", "wfreq": 7.0}, {"id": 961, "ethnicity": "Caucasian", "gender": "F", "age": 35.0, "location": "Edmonton,AB", "bbtype": "i", "wfreq": 4.0}, {"id": 962, "ethnicity": "Caucasian", "gender": "F", "age": 56.0, "location": "Washington,DC", "bbtype": "i", "wfreq": 1.0}, {"id": 963, "ethnicity": "Caucasian", "gender": "F", "age": 33.0, "location": "Ithaca/NY", "bbtype": "I", "wfreq": 3.5}, {"id": 964, "ethnicity": "Caucasian", "gender": "F", "age": 43.0, "location": "UK/London", "bbtype": "I", "wfreq": 7.0}, {"id": 966, "ethnicity": "Caucasian", "gender": "M", "age": 56.0, "location": "Needham/MA", "bbtype": "I", "wfreq": 0.0}, {"id": 967, "ethnicity": "Caucasian/Jewish", "gender": "F", "age": 43.0, "location": "ChapelHill/NC", "bbtype": "I", "wfreq": 1.0}, {"id": 968, "ethnicity": "Caucasian", "gender": "F", "age": 38.0, "location": "St.Louis/MI", "bbtype": "I", "wfreq": 6.0}, {"id": 969, "ethnicity": "Caucasian/Asian", "gender": "F", "age": 31.0, "location": "ChevyChase/MD", "bbtype": "I", "wfreq": 7.0}, {"id": 970, "ethnicity": "Caucasian", "gender": "F", "age": 42.0, "location": "SanDiego/CA", "bbtype": "i", "wfreq": 0.0}, {"id": 971, "ethnicity": "Asian(South)", "gender": "M", "age": 36.0, "location": "SantaBarbara/CA", "bbtype": "I", "wfreq": 1.0}, {"id": 972, "ethnicity": "Caucasian", "gender": "F", "age": 31.0, "location": "Charlotte/NC", "bbtype": "I", "wfreq": 7.0}, {"id": 973, "ethnicity": "Caucasian", "gender": "F", "age": 4.0, "location": "Charlotte/NC", "bbtype": "I", "wfreq": 1.0}, {"id": 974, "ethnicity": "Caucasian", "gender": "F", "age": 57.0, "location": "Raleigh/NC", "bbtype": "I", "wfreq": null}, {"id": 975, "ethnicity": "Caucasian", "gender": "F", "age": 60.0, "location": "NewCanaan/CT", "bbtype": "I", "wfreq": 3.0}, {"id": 978, "ethnicity": "Hispanic", "gender": "F", "age": 21.0, "location": "Durham/NC", "bbtype": null, "wfreq": null}, {"id": 1233, "ethnicity": "Caucasian", "gender": "M", "age": 34.0, "location": null, "bbtype": "I", "wfreq": 0.0}, {"id": 1234, "ethnicity": "Caucasian", "gender": "F", "age": null, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1235, "ethnicity": "Caucasian", "gender": "F", "age": 43.0, "location": null, "bbtype": null, "wfreq": 0.0}, {"id": 1236, "ethnicity": "Caucasian", "gender": "F", "age": 54.0, "location": null, "bbtype": null, "wfreq": 6.0}, {"id": 1237, "ethnicity": "Caucasian", "gender": "F", "age": 9.0, "location": "ChapelHill,NC", "bbtype": "i", "wfreq": 2.0}, {"id": 1238, "ethnicity": "Caucasian", "gender": "F", "age": 41.0, "location": "Raleigh,NC", "bbtype": "i", "wfreq": 0.0}, {"id": 1242, "ethnicity": "Caucasian", "gender": "F", "age": 44.0, "location": "Raleigh,NC", "bbtype": "i", "wfreq": 1.0}, {"id": 1243, "ethnicity": "Caucasian", "gender": "M", "age": 49.0, "location": "Raleigh,NC", "bbtype": "i", "wfreq": null}, {"id": 1246, "ethnicity": "Caucasian", "gender": "F", "age": 2.0, "location": "Atlanta,GA", "bbtype": null, "wfreq": 7.0}, {"id": 1253, "ethnicity": "Caucasian", "gender": "M", "age": 24.0, "location": "Voss,NC", "bbtype": "i", "wfreq": 5.0}, {"id": 1254, "ethnicity": "Caucasian", "gender": "F", "age": 1.0, "location": "Voss,NC", "bbtype": "o", "wfreq": 5.0}, {"id": 1258, "ethnicity": "Caucasian", "gender": "f", "age": 31.0, "location": "Smithfield,NC", "bbtype": "i", "wfreq": 7.0}, {"id": 1259, "ethnicity": "Caucasian", "gender": "m", "age": 33.0, "location": "Smithfield,NC", "bbtype": null, "wfreq": 7.0}, {"id": 1260, "ethnicity": "Caucasian", "gender": "m", "age": 10.0, "location": "Smithfield,NC", "bbtype": null, "wfreq": 7.0}, {"id": 1264, "ethnicity": "Caucasian", "gender": "m", "age": 46.0, "location": "Raleigh,NC", "bbtype": "i", "wfreq": 0.0}, {"id": 1265, "ethnicity": "Caucasian", "gender": "f", "age": 10.0, "location": "Raleigh,NC", "bbtype": "i", "wfreq": 0.0}, {"id": 1273, "ethnicity": "Caucasian", "gender": "M", "age": 60.0, "location": null, "bbtype": "I", "wfreq": 3.0}, {"id": 1275, "ethnicity": "Caucasian", "gender": "F", "age": 18.0, "location": null, "bbtype": "I", "wfreq": 0.0}, {"id": 1276, "ethnicity": "Caucasian", "gender": "M", "age": 34.0, "location": null, "bbtype": "O", "wfreq": 0.0}, {"id": 1277, "ethnicity": "Caucasian", "gender": "F", "age": 67.0, "location": null, "bbtype": "I", "wfreq": 7.0}, {"id": 1278, "ethnicity": null, "gender": "M", "age": 44.0, "location": null, "bbtype": "I", "wfreq": 7.0}, {"id": 1279, "ethnicity": "Black", "gender": "F", "age": 60.0, "location": null, "bbtype": "O", "wfreq": 9.0}, {"id": 1280, "ethnicity": "PacificIslander", "gender": "F", "age": 30.0, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1281, "ethnicity": "Caucasian", "gender": "F", "age": 55.0, "location": null, "bbtype": "I", "wfreq": 3.0}, {"id": 1282, "ethnicity": "Caucasian", "gender": "F", "age": 53.0, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1283, "ethnicity": "Caucasian", "gender": "M", "age": 48.0, "location": null, "bbtype": "I", "wfreq": 7.0}, {"id": 1284, "ethnicity": "Caucasian", "gender": "F", "age": 30.0, "location": null, "bbtype": "I", "wfreq": 7.0}, {"id": 1285, "ethnicity": "Caucasian", "gender": "M", "age": 42.0, "location": null, "bbtype": "Both", "wfreq": null}, {"id": 1286, "ethnicity": "Caucasian", "gender": "M", "age": 38.0, "location": null, "bbtype": "I", "wfreq": 7.0}, {"id": 1287, "ethnicity": "Caucasian", "gender": "M", "age": 46.0, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1288, "ethnicity": "Caucasian", "gender": "F", "age": 52.0, "location": null, "bbtype": "I", "wfreq": 7.0}, {"id": 1289, "ethnicity": "Black", "gender": "F", "age": 38.0, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1290, "ethnicity": "Caucasian", "gender": "F", "age": 53.0, "location": null, "bbtype": "I", "wfreq": 5.0}, {"id": 1291, "ethnicity": "Caucasian", "gender": "F", "age": 49.0, "location": null, "bbtype": "I", "wfreq": 0.0}, {"id": 1292, "ethnicity": "Caucasian", "gender": "M", "age": 46.0, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1293, "ethnicity": "Caucasian", "gender": "F", "age": 68.0, "location": null, "bbtype": "I", "wfreq": 1.0}, {"id": 1294, "ethnicity": "Caucasian", "gender": "F", "age": 46.0, "location": null, "bbtype": "I", "wfreq": null}, {"id": 1295, "ethnicity": "Caucasian", "gender": "F", "age": 48.0, "location": null, "bbtype": "Both", "wfreq": 7.0}, {"id": 1296, "ethnicity": "Black", "gender": "f", "age": 10.0, "location": "Pinehurst,NC", "bbtype": "i", "wfreq": 4.0}, {"id": 1297, "ethnicity": "Caucasion", "gender": "f", "age": 10.0, "location": "Pinehurst,NC", "bbtype": null, "wfreq": 5.0}, {"id": 1298, "ethnicity": "White", "gender": "m", "age": 12.0, "location": "Pinehurst,NC", "bbtype": "i", "wfreq": 3.0}, {"id": 1308, "ethnicity": "Black", "gender": "f", "age": 40.0, "location": "Durham,NC", "bbtype": null, "wfreq": 7.0}, {"id": 1309, "ethnicity": "Black", "gender": "f", "age": 6.0, "location": "Durham,NC", "bbtype": null, "wfreq": 5.0}, {"id": 1310, "ethnicity": "Black", "gender": "m", "age": 3.0, "location": "Durham,NC", "bbtype": null, "wfreq": 5.0}, {"id": 1374, "ethnicity": "Caucasian", "gender": "F", "age": 55.0, "location": "Cary,NC", "bbtype": "o", "wfreq": 7.0}, {"id": 1415, "ethnicity": null, "gender": null, "age": null, "location": null, "bbtype": "Unknown", "wfreq": null}, {"id": 1439, "ethnicity": "Caucasian", "gender": "F", "age": null, "location": "Sarasota,FL", "bbtype": null, "wfreq": null}, {"id": 1441, "ethnicity": "Caucasian", "gender": "F", "age": 36.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 4.0}, {"id": 1443, "ethnicity": "Caucasian", "gender": "F", "age": 57.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 3.0}, {"id": 1486, "ethnicity": "Caucasian", "gender": "F", "age": 33.0, "location": "Shrewsbury,UK", "bbtype": "I", "wfreq": 0.0}, {"id": 1487, "ethnicity": "Caucasian", "gender": "M", "age": 30.0, "location": "Shrewsbury,UK", "bbtype": "I", "wfreq": 0.0}, {"id": 1489, "ethnicity": "Caucasian", "gender": "F", "age": 28.0, "location": "WashingtonDC", "bbtype": "I", "wfreq": 0.0}, {"id": 1490, "ethnicity": "Caucasian", "gender": "F", "age": 27.0, "location": "DurhamNC", "bbtype": "I", "wfreq": 0.0}, {"id": 1491, "ethnicity": "Caucasian", "gender": "F", "age": 24.0, "location": "WashingtonDC", "bbtype": "I", "wfreq": 3.0}, {"id": 1494, "ethnicity": "Caucasian", "gender": "M", "age": 35.0, "location": "Boone,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1495, "ethnicity": "Caucasian", "gender": "F", "age": 57.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 3.0}, {"id": 1497, "ethnicity": "Caucasian", "gender": "M", "age": 35.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1499, "ethnicity": "Caucasian", "gender": "M", "age": 33.0, "location": "Waynesville,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1500, "ethnicity": "Caucasian", "gender": "M", "age": 32.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1501, "ethnicity": null, "gender": "M", "age": 38.0, "location": "FallsChurch,VA", "bbtype": "I", "wfreq": 0.0}, {"id": 1502, "ethnicity": "Caucasian", "gender": "F", "age": 27.0, "location": "Boone,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1503, "ethnicity": "Caucasian", "gender": "F", "age": 32.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 7.0}, {"id": 1504, "ethnicity": "Caucasian", "gender": "F", "age": 27.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1505, "ethnicity": "Caucasian", "gender": "F", "age": 26.0, "location": "Durham,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1506, "ethnicity": "Caucasian", "gender": "F", "age": 21.0, "location": "Raleigh,NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1507, "ethnicity": "Caucasian", "gender": "F", "age": 46.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1508, "ethnicity": "Caucasian", "gender": "M", "age": 60.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1510, "ethnicity": "Black", "gender": "F", "age": 21.0, "location": "NC", "bbtype": "I", "wfreq": 1.0}, {"id": 1511, "ethnicity": "Caucasian", "gender": "F", "age": 46.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1512, "ethnicity": "Caucasian", "gender": "M", "age": 55.0, "location": "NC", "bbtype": "I", "wfreq": 7.0}, {"id": 1513, "ethnicity": "Caucasian", "gender": "M", "age": 15.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1514, "ethnicity": "Caucasian", "gender": "F", "age": 3.0, "location": "NC", "bbtype": "o", "wfreq": 7.0}, {"id": 1515, "ethnicity": "Caucasian", "gender": "F", "age": 51.0, "location": "NC", "bbtype": "I", "wfreq": 1.0}, {"id": 1516, "ethnicity": "Caucasian", "gender": "M", "age": 57.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1517, "ethnicity": "Caucasian", "gender": "M", "age": 27.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1518, "ethnicity": "Caucasian", "gender": "F", "age": 25.0, "location": "GA", "bbtype": "I", "wfreq": 0.0}, {"id": 1519, "ethnicity": "Caucasian", "gender": "F", "age": 25.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1521, "ethnicity": "Caucasian", "gender": "F", "age": 10.0, "location": "NC", "bbtype": "I", "wfreq": 0.0}, {"id": 1524, "ethnicity": "Caucasian", "gender": "M", "age": 14.0, "location": "NC", "bbtype": "I", "wfreq": 4.0}, {"id": 1526, "ethnicity": "Caucasian", "gender": "M", "age": 6.0, "location": "NC", "bbtype": "I", "wfreq": 7.0}, {"id": 1527, "ethnicity": "Caucasian", "gender": "F", "age": 34.0, "location": "NC", "bbtype": "I", "wfreq": 7.0}, {"id": 1530, "ethnicity": "Caucasian", "gender": "F", "age": 54.0, "location": "NC", "bbtype": "I", "wfreq": 1.0}, {"id": 1531, "ethnicity": "Caucasian", "gender": "M", "age": 39.0, "location": "NC", "bbtype": "I", 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