Two types of cancer data sets are given Type 1 Glioblastoma, Type 2 Glioma follow the steps given below and report the results
(Note submit the coding file separately and written analysis separately) WRITTEN ANALYSIS MST INCLUDE MATERIALS AND METHODS RESULTS AND DISCUSSION, SUMMARY
R or Python you are free to use the language of your preference.
Glioblastoma
Gene expression analysis
Gene enrichment analysis
Pathway enrichment analysis
Hub gene identification (clustering)
identify common genes in this data sets
Glioma
Gene expression analysis
Gene enrichment analysis
Pathway enrichment analysis
Hub gene identification (clustering)
identify common genes in this data sets
ü If both glioma and glioblastoma have common genes try to identify the enrichment of the common gene in various pathways? (Or
) Identify common genes try to identify hub genes now to these hub gene modules try to identify in which pathway they are enriched?
ü If both do not have common genes, then report they don't have common genes?