.The nucleotide diversity Πn among a set of n aligned sequences
was introduced in Section 13.8.2. It is defined by
where dij is the number of segregating sites between sequences i and j. (This is
the Hamming distance between the sequences.) Show that under the infinitely
many sites model of mutation, the expected value of the nucleotide diversity
is θ.
.In Section 13.8.3 we found a formula for ETMRCA for a sample of
n genes. Calculate the variance of TMRCA and find its value for large samples.
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