. gives a 60 bp region of the cytochrome oxidase subunit II coding sequence for five primates. a. Write an R function to calculate the matrix of pairwise distances defined in for these data. b. Find...

.

gives a 60 bp region of the cytochrome oxidase subunit

II coding sequence for five primates.

a. Write an R function to calculate the matrix of pairwise distances defined

in for these data.

b. Find a UPGMA tree based on these distances, and compare to the results

in Section 10.4.

.
Discuss the logical connection between the data structure introduced

in Section 11.5.1 and the procedure for agglomerative clustering

described in Section 10.4.1.