. Consider a tree with just two leaves. Suppose the branch to species 1 has length t1 and the branch to species 2 has length t2. Show that for a reversible mutation model, the probability Fij of...



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Consider a tree with just two leaves. Suppose the branch to


species 1 has length t1 and the branch to species 2 has length t2. Show that


for a reversible mutation model, the probability Fij of observing base i in


species 1 and base j in species 2 depends on t1 and t2 only through the


sum t1 + t2. This result is known as the pulley principle, which says that


we cannot tell the direction of time. (For the meaning of “pulley principle,”


imagine that two leaves are connected by a rope through a pulley mounted


at the node immediately above it. If you lengthen the rope on one side of the


pulley, the rope length on the other side must correspondingly shorten.)








May 05, 2022
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