Submitted fileAssignment 1 Assignment 5 • Write a script which can calculate the degree and...

Question

Submitted fileAssignment 1 Assignment 5  • Write a script which can calculate the degree and clustering  coefficient for every node (protein) in the human protein  interaction network (attached).  Now calculate the average  clustering coefficient of the network. Finally,  test whether the  network has a scale-free structure by plotting the degree  distribution ? • Now write another script which can calculate the shortest path  lengths between every pair of nodes (proteins) in the attached  files (two files are attached). Compare the path length  distributions between the two protein sets using a wilcox test.    LAS1L FKBP4 RBM6 UPF1 SLC25A5 DHX33 ELAC2 CCDC124 RPS20 CSDE1 AKAP8L UTP18 PTBP1 DCN MATR3 SAMD4A AQR STRAP SEC63 BCLAF1 TFB1M GRN ZCCHC8 NSUN2 SKIV2L2 STAU2 CTNNA1 YTHDC2 POLR2B TPR MAP4 NOP16 FAM120A R3HDM1 PTCD2 RRP12 MRTO4 THRAP3 NOP58 USP36 MLL3 PUM2 MRPL43 ZFR RC3H2 ZC3H11A PARP12 ALDH18A1 CSDA CCAR1   GNL3L FMR1 FRAXA UBA1 CSTF2 MECP2 PHF6 RBM10 GSPT2 SLC25A5 EIF1AX NKRF RPS4X RBMX2 HTATSF1 LAS1L MBNL3 HUWE1 RPL10 RPL15 RBMX NONO RPGR UPF3B RBM3 HNRNPH2 UTP14A DKC1 MEX3C DDX3X FLNA FAM120C   OFFICIAL_SYMBOL_A       OFFICIAL_SYMBOL_B 1810055G02Rik	MPRIP 1810055G02Rik	RAI14 1810055G02Rik	TPM1 2810046L04Rik	ARF1 2810046L04Rik	ARF3 4922501C03Rik	CPNE4 4930572J05Rik	C8orf55 4930572J05Rik	PRKDC 4930572J05Rik	SPRR2B 4930572J05Rik	SPRR2D 4930572J05Rik	SPRR2E 4930572J05Rik	SPRR2G 9830001H06Rik	C1QBP 9830001H06Rik	CCDC165 9830001H06Rik	DYNLL1 9830001H06Rik	KIAA0889 9830001H06Rik	PPP2CA 9830001H06Rik	PPP2R1A 9830001H06Rik	PPP2R5A 9830001H06Rik	PPP2R5E 9830001H06Rik	RNF41 A1CF	APOBEC1 A1CF	KHSRP A1CF	SYNCRIP A2M	ADAMTS1 A2M	APOE A2M	IL10 A2M	IL4 A2M	LCAT A2M	LEP A2M	NGF A2M	PAEP AAGAB	EIF3C AATF	CHEK2 AATF	MAGED1 AATF	MAPT AATF	PAWR AATF	PCBD2 AATF	RB1 AATF	RBL1 AATF	RBL2 AATF	RELA AATF	Tsg101 ABCA1	AOX1 ABCA1	APOA1 ABCA1	CDC42 ABCA1	COPS5 ABCA1	CREBBP ABCA1	FADD ABCA1	FLOT1 ABCA1	HGS ABCA1	PRPF8 ABCA1	SDHB ABCA1	SNTB2 ABCA1	STX12 ABCA1	UBC ABCA1	UGP1 ABCA1	XPC ABCA13	APOA1 ABCA13	APOA2 ABCA2	CDK5RAP2 ABCA4	CNGB1 ABCB1	DHX9 ABCB1	PIM1 ABCB1	UBC ABCB7	FECH ABCC2	PDZD3 ABCC2	Rdx ABCC2	SLC9A3R1 ABCC8	KCNJ11 ABCC8	RAPGEF4 ABCD1	ABCD2 ABCD3	ABCD1 ABCD3	PEX19 ABCD4	PEA15 ABCD4	XRCC6 ABCE1	RNASEL ABCE1	UBASH3A ABCF3	ACIN1 ABCF3	DNALI1 ABCF3	LAMTOR1 ABCF3	TOE1 ABCG1	UBC ABCG5	ABCG8 ABHD16A	ATP5G3 ABHD16A	DNAJC1 ABHD16A	GPRC5C ABHD16A	HM13 ABHD16A	IFITM1 ABHD16A	RNF5 ABHD16A	SAFB ABHD16A	SPAG7 ABHD16A	TMEM147 ABHD16A	TMEM222 ABI1	ABL1 ABI1	ENAH ABI1	EPS8 ABI1	NCK1 ABI2	ABL1 ABI2	CCDC53 ABI2	IFT20 ABI2	KRT20 ABI2	TRIM32 ABI2	UBC ABI3	ABI3BP ABI3	CEP170P1 ABI3	CEP44 ABI3	DTNBP1 ABI3	PAK1 ABI3	PAK2 ABL1	ABI1 ABL1	ABI2 ABL1	ABL1 ABL1	ABL2 ABL1	ATM ABL1	ATR ABL1	BAG1 ABL1	BCAR1 ABL1	BCR ABL1	BRCA1 ABL1	CAT ABL1	CBL ABL1	CREB1 ABL1	CRKL ABL1	Creb1 ABL1	DOK1 ABL1	EPHA3 ABL1	EPHB2 ABL1	EVL ABL1	GPX1 ABL1	GRB10 ABL1	GRB2 ABL1	HCK ABL1	HSP90AA1 ABL1	HSPA4 ABL1	INPPL1 ABL1	JAK1 ABL1	Jak1 ABL1	MDM2 ABL1	MICAL1 ABL1	MTOR ABL1	NCK1 ABL1	NCOA3 ABL1	NEDD9 ABL1	NFKBIA ABL1	NTRK1 ABL1	PAG1 ABL1	PARK2 ABL1	PCNA ABL1	PIK3R1 ABL1	PLCG1 ABL1	PRKDC ABL1	PSMA4 ABL1	PSMA7 ABL1	PTPN6 ABL1	RAD51 ABL1	RAD9A ABL1	RB1 ABL1	RFX1 ABL1	RYBP ABL1	SHC1 ABL1	SHD ABL1	SHE ABL1	SORBS2 ABL1	SPTA1 ABL1	SPTAN1 ABL1	SRC ABL1	STK4 ABL1	STUB1 ABL1	TERF1 ABL1	TOPBP1 ABL1	TP53 ABL1	TP73 ABL1	TUB ABL1	UBC ABL1	VAV1 ABL1	WRNIP1 ABL1	YTHDC1 ABL1	ZDHHC16 ABL2	ABL1 ABL2	CAT ABL2	PSMA7 ABL2	SORBS2 ABLIM1	BEGAIN ABLIM1	CALCOCO2 ABLIM1	HOOK2 ABLIM1	LDOC1 ABLIM1	TRAF2 ABLIM1	TSC22D4 ABLIM1	USHBP1 ABLIM1	VIM ABLIM3	ACTC1 ABTB1	DNTTIP1 ABTB2	CUL3 ABTB2	DNTT ABTB2	EEF1A1 ABTB2	RBX1 ABTB2	UBC ACACA	BRCA1 ACACA	CHGB ACADVL	ACADVL ACAN	FBLN2 ACAP1	IFFO1 ACCN1	ACCN3 ACCN1	Pick1 ACCN2	PICK1 ACCN3	DLG4 ACCN3	GOPC ACCN3	LIN7B ACCN3	MAGI1 ACCS	ACCS ACCS	FBF1 ACD	POT1 ACD	TERF1 ACD	TERF2 ACD	TINF2 ACD	XRCC6 ACHE	COL1A1 ACIN1	RNPS1 ACIN1	SAP18 ACO1	FBXL5 ACO1	UBC ACP1	EPHA2 ACP1	FNBP1L ACP1	MRPL20 ACP1	SFMBT1 ACP5	C2orf18 ACP6	C2orf18 ACP6	DHCR7 ACP6	DHX36 ACP6	ERH ACP6	GNG7 ACP6	ILK ACP6	LIMS1 ACP6	RGS10 ACP6	RSU1 ACPP	ACPP ACSM3	EHMT2 ACTA1	CCT4 ACTA1	CCT5 ACTA1	CFL1 ACTA1	DHX9 ACTA1	DMD ACTA1	DNASE1 ACTA1	ERD10 ACTA1	GC ACTA1	HDAC4 ACTA1	HDAC8 ACTA1	NRAP ACTA1	PCYT1B ACTA1	RPS6KB1 ACTA1	TMSB4X ACTA1	TMSB4Y ACTA1	TRIP6 ACTA2	CCT4 ACTA2	CCT5 ACTA2	PCYT1B ACTB	ACTB ACTB	ACTG1 ACTB	ACTR2 ACTB	ACTR3 ACTB	CCT2 ACTB	CCT5 ACTB	CFL1 ACTB	CFL2 ACTB	CTGF ACTB	Cct3 ACTB	Cct4 ACTB	Cct5 ACTB	Cct6a ACTB	Cct7 ACTB	Cct8 ACTB	DHX9 ACTB	DSTN ACTB	ESR1 ACTB	HMMR ACTB	HNRNPU ACTB	Hspa1b ACTB	NCALD ACTB	NCF1 ACTB	NCF2 ACTB	PCYT1B ACTB	POLR2A ACTB	Pcyt1a ACTB	Pcyt1b ACTB	RAC1 ACTB	RAC2 ACTB	SSH1 ACTB	SSH2 ACTB	TAF11 ACTC1	PDCD6IP ACTC1	SYNE2 ACTG1	ACTG1 ACTG1	CFL1 ACTG1	CFL2 ACTG1	DSTN ACTG1	PFN2 ACTG1	SH3GL2 ACTG1	TMSB4X ACTL6A	EWSR1 ACTL6A	FLII ACTL6A	KAT2A ACTL6A	KAT5 ACTL6A	RUVBL1 ACTL6A	TP53 ACTL6A	TRRAP ACTL6A	YY1 ACTL6B	CTBP1 ACTN1	ACTN1 ACTN1	CDK5R2 ACTN1	CTNNA1 ACTN1	DAG1 ACTN1	MAGEA11 ACTN1	MYOT ACTN1	MYOZ1 ACTN1	PDLIM1 ACTN1	PKN1 ACTN1	PYGB ACTN1	SSX2IP ACTN1	TTN ACTN1	TUBA1A ACTN1	XRCC4 ACTN1	ZYX ACTN2	ACTN3 ACTN2	ADAM12 ACTN2	DLG1 ACTN2	GRIN2B ACTN2	KCNA5 ACTN2	MYOZ1 ACTN2	MYPN ACTN2	PDLIM1 ACTN2	TNN ACTN2	Tuba1a ACTN3	ACTN2 ACTN4	CAMK2A ACTN4	CAMK2B ACTN4	ESR1 ACTN4	INO80 ACTN4	Lrrc7 ACTN4	MEF2A ACTN4	MYOZ1 ACTN4	MYOZ2 ACTN4	PDLIM1 ACTN4	VDR ACTR1A	NUMA1 ACTR3	ACTR2 ACTR3	ARPC1B ACTR3	ARPC2 ACTR3	ARPC3 ACTR3	ARPC4 ACTR3	CTTN ACTR3B	ACTR2 ACTR3B	ARPC1A ACTR3B	ARPC1B ACTR3B	ARPC2 ACTR3B	ARPC3 ACTR3B	ARPC3P1 ACTR3B	ARPC4 ACTR3B	ARPC5 ACTR3B	ARPC5L ACTR3B	CDK4 ACTR3B	KIAA1967 ACTR3B	TWF2 ACTR5	ACTL6A ACTR5	ACTR8 ACTR5	INO80 ACTR5	INO80B ACTR5	INO80C ACTR5	INO80D ACTR5	INO80E ACTR5	MCRS1 ACTR5	NFRKB ACTR5	RUVBL1 ACTR5	RUVBL2 ACTR5	TFPT ACTR5	UCHL5 ACTR5	YY1 ACTR8	ACTL6A ACTR8	ACTR5 ACTR8	INO80 ACTR8	INO80B ACTR8	INO80C ACTR8	INO80D ACTR8	INO80E ACTR8	MCRS1 ACTR8	NFRKB ACTR8	RUVBL1 ACTR8	RUVBL2 ACTR8	TFPT ACTR8	UCHL5 ACTR8	YY1 ACVR1	Ap2b1 ACVR1	BMPR2 ACVR1	Cdk14 ACVR1	Chn1 ACVR1	FNTA ACVR1	Fancl ACVR1	Fbxo3 ACVR1	Fcho1 ACVR1	Fgd6 ACVR1	Fkbp4 ACVR1	GDF5 ACVR1	IGSF1 ACVR1	Ikbkb ACVR1	Ilkap ACVR1	Jub ACVR1	Naa20 ACVR1	Nkiras1 ACVR1	Nras ACVR1	Nuak2 ACVR1	Plek ACVR1	Plekhb1 ACVR1	Rab17 ACVR1	Rab33b ACVR1	Rab3b ACVR1	Rab6b ACVR1	Rap2a ACVR1	Rasd2 ACVR1	Rhebl1 ACVR1	Rhobtb1 ACVR1	Rhod ACVR1	Rhoj ACVR1	Rps27a ACVR1	Rras2 ACVR1	SMAD1 ACVR1	SMAD5 ACVR1	SMURF1 ACVR1	Sqstm1 ACVR1	Stat1 ACVR1	Stx8 ACVR1	TSC22D1 ACVR1	Tgfbr1 ACVR1	Ube2e3 ACVR1	Ube2r2 ACVR1	Uhmk1 ACVR1	Usp21 ACVR1	Usp39 ACVR1	Wdr61 ACVR1B	ACVR1 ACVR1B	ACVR2A ACVR1B	FKBP1A ACVR1B	IGSF1 ACVR1B	NEDD4L ACVR1B	SMAD2 ACVR1B	SMAD3 ACVR1B	SMAD7 ACVR1B	SMURF1 ACVR1B	TSC22D1 ACVR1B	UBC ACVR2A	BMP6 ACVR2A	GDF5 ACVR2A	IGSF1 ACVR2A	INHA ACVR2A	INHBA ACVR2A	MAGI2 ACVR2A	SYNJ2BP ACVR2B	ACVR1B ACVR2B	BMP6 ACVR2B	GDF5 ACVR2B	IGSF1 ACVR2B	MSTN ACVRL1	IGSF1 ACVRL1	TGFB1 ACVRL1	TSC22D1 ACY1	ACY1 ACY1	TTC1 ADA	ADORA1 ADA	ADORA2A ADA	DRD1 ADA	NR3C1 ADAM10	GRB2 ADAM10	LCK ADAM10	MAD2L1 ADAM11	STC2 ADAM12	IGFBP3 ADAM12	IGFBP5 ADAM12	PIK3R1 ADAM15	GRB2 ADAM15	HCK ADAM15	LCK ADAM15	MAD2L1 ADAM15	SH3GL2 ADAM15	SNX9 ADAM15	TRIP13 ADAM17	DLG1 ADAM17	MAD2L1 ADAM17	MAPK1 ADAM19	ABI2 ADAM19	COPB1 ADAM2	CRYAB ADAM2	DNM1 ADAM22	DLG4 ADAM22	LGI1 ADAM9	MAD2L2 ADAM9	PRKCD ADAM9	SH3GL2 ADAM9	SNX9 ADAMTS1	VEGFA ADAMTSL4	CATSPER1 ADAMTSL4	DLK2 ADAMTSL4	KRTAP4-12 ADAMTSL4	NTN4 ADAP1	ANP32A ADAP1	CSNK1A1 ADAP1	NCL ADAP1	PIK3CA ADAP1	PRKCI ADAP1	PRKCZ ADAP1	PRKD1 ADAP2	EEF1G ADAR	XPO1 ADARB1	PIN1 ADARB1	WWP2 ADCY2	ADCY5 ADCY5	ADCY5 ADCY5	Mycbp2 ADCY5	RGS2 ADCY6	CHRNA7 ADCYAP1	CPAMD8 ADCYAP1	SCTR ADD1	CALM1 ADD1	HDAC1 ADD1	ID2 ADD1	ID3 ADD1	SIN3A ADD1	SMARCA2 ADD1	SMARCA4 ADD1	SMARCC1 ADD1	SPTAN1 ADD1	SPTB ADH5	ADH5 ADH5	CHD3 ADH7	ADH7 ADI1	DBT ADNP	ARID1A ADNP	SMARCA4 ADNP	SMARCC2 ADORA1	DRD1 ADORA1	GNAI2 ADORA2A	ADORA2A ADORA2A	Actn1 ADORA2A	Actn2 ADORA2A	Actn3 ADORA2A	Actn4 ADORA2A	DRD2 ADRA1B	AP2M1 ADRA2B	EIF2B1 ADRA2C	EIF2B1 ADRB1	ARRB1 ADRB1	GIPC1 ADRB2	ADRB2 ADRB2	ADRBK1 ADRB2	AKAP12 ADRB2	ARRDC3 ADRB2	Arrb2 ADRB2	CAV3 ADRB2	CUL2 ADRB2	EGLN3 ADRB2	EIF2B1 ADRB2	GRB2 ADRB2	NEDD4 ADRB2	OPRD1 ADRB2	PPP3CA ADRB2	SLC9A3R1 ADRB2	SLC9A3R2 ADRB2	SRC ADRB2	TCEB1 ADRB2	UBC ADRB2	VHL ADRB3	SRC ADRBK1	FSHR ADRBK1	GNA15 ADRBK1	GNAQ ADRBK1	HDAC6 ADRBK1	PDC ADRBK1	PDCL ADRBK1	PDE6G ADRBK1	PRKCB ADRBK1	RHO ADRBK1	SNCA ADRBK1	SNCB ADRBK1	SNCG ADRBK1	SRC ADRBK2	CXCR4 ADRBK2	UBC ADRM1	ATP6V0D2 ADRM1	PSMC5 ADRM1	PSMD1 ADRM1	PSMD2 ADRM1	PSMD4 ADRM1	UBC ADRM1	UCHL5 AEBP2	RALYL AEBP2	SUZ12 AES	AES AES	AR AES	GTF2E1 AES	HMGB1 AES	HNF1A AES	HNRNPAB AES	MED31 AES	PTRH2 AES	RELA AES	SH3GL3 AES	TLE1 AES	TLE3 AFAP1	ACTC1 AFAP1	AFAP1 AFAP1	PRKCA AFAP1	PRKCB AFAP1	PRKCD AFAP1	PRKCE AFAP1	PRKCG AFF1	AFF1 AFF1	AFF4 AFF1	BRD4 AFF1	CCNT1 AFF1	CDK9 AFF1	DDX6 AFF1	DOT1L AFF1	HEXIM1 AFF1	HIST3H3 AFF1	MLL AFF1	MLLT1 AFF1	MLLT10 AFF1	MLLT3 AFF1	NPM1 AFF1	NT5E AFF1	PCSK1 AFF1	POLR2A AFF1	RELA AFF4	AFF1 AFF4	CCNT1 AFF4	CDK9 AFF4	ELL2 AFF4	MLL AFF4	MLLT1 AFF4	MLLT3 AFP	CCR5 AGA	AGA AGAP2	EPB41L1 AGAP2	PIK3R1 AGFG1	EPS15 AGFG2	EPS15 AGL	UBC AGPS	GNPAT AGR2	BRD7 AGR2	CCDC90B AGR2	CRMP1 AGR2	DAG1 AGR2	LYPD3 AGR2	MED31 AGR3	DAG1 AGR3	LYPD3 AGRP	MC4R AGT	EWSR1 AGTR1	ADRBK1 AGTR1	AGTRAP AGTR1	ARRB2 AGTR1	BDKRB2 AGTR1	GRK5 AGTR1	MAPK1 AGTR1	TRAF3 AGTR1	ZBTB16 AGTR2	AGTRAP AGTR2	MTUS1 AGTRAP	AGTRAP AGTRAP	GNB2L1 AGXT2L2	AGXT2L2 AHR	AIP AHR	ARNT AHR	CCNT1 AHR	CTNNB1 AHR	ESR1 AHR	FOXA1 AHR	GTF2F1 AHR	GTF2F2 AHR	HSP90AA1 AHR	NCOA2 AHR	NEDD8 AHR	NR2F1 AHR	NRIP1 AHR	RB1 AHR	RELA AHR	SMARCA4 AHR	SRC AHR	TBP AHRR	ANKRA2 AHRR	ESR1 AHRR	HDAC4 AHRR	HDAC5 AHSP	ZC3H12A AI837181	AHNAK AI837181	ANXA5 AI837181	ARF1 AI837181	ARF3 AI837181	ASS1 AI837181	C11orf68 AI837181	CALR AI837181	CANX AI837181	CAPRIN1 AI837181	CDK1 AI837181	CSDE1 AI837181	DDX39A AI837181	DDX39B AI837181	DDX5 AI837181	DHX15 AI837181	EIF4A1 AI837181	EIF4A3 AI837181	EIF4H AI837181	FASN AI837181	GNB2L1 AI837181	GOT2 AI837181	GPI AI837181	HNRNPA3 AI837181	HNRNPAB AI837181	HNRNPK AI837181	HNRNPR AI837181	HNRNPU AI837181	NACA AI837181	NONO AI837181	P4HB AI837181	PA2G4 AI837181	PABPC1 AI837181	PDIA3 AI837181	PDIA4 AI837181	PDIA6 AI837181	PFN1 AI837181	PGK1 AI837181	PHB AI837181	PHB2 AI837181	PHGDH AI837181	PKM2 AI837181	PPIA AI837181	PPIB AI837181	RAN AI837181	RBMX AI837181	RCN1 AI837181	RUVBL2 AI837181	SERBP1 AI837181	SET AI837181	SFPQ AI837181	SRSF1 AI837181	SRSF5 AI837181	SRSF6 AI837181	STRAP AI837181	SYNCRIP AI837181	TAGLN2 AI837181	TFRC AI837181	TKT AI837181	TRAP1 AI837181	UBA1 AI837181	VCP AI837181	VDAC1 AI837181	XRCC6 AICDA	CTNNBL1 AICDA	KPNA1 AICDA	PRKDC AICDA	TUBB4B AIF1	CASP10 AIF1	CASP8 AIFM1	HSPA1A AIFM1	SETDB1 AIFM1	STC2 AIFM1	UBC AIFM1	XIAP AIMP1	PSMA7 AIMP1	RARS AIMP1	SMURF2 AIMP2	ACTB AIMP2	AIMP2 AIMP2	C19orf57 AIMP2	CEP170P1 AIMP2	CHD3 AIMP2	CNO AIMP2	DARS AIMP2	DARS2 AIMP2	DEAF1 AIMP2	DSN1 AIMP2	FGB AIMP2	HSPA4 AIMP2	IARS AIMP2	KARS AIMP2	KDR AIMP2	KIAA0947 AIMP2	KIAA1377 AIMP2	KLC2 AIMP2	LMO3 AIMP2	LNX1 AIMP2	LUC7L2 AIMP2	MATR3 AIMP2	MCF2L AIMP2	PARK2 AIMP2	PPP2R1A AIMP2	PSME1 AIMP2	QARS AIMP2	RARS AIMP2	STUB1 AIMP2	TP53 AIMP2	TRMT2A AIMP2	UBC AIMP2	ZC3H12A AIP	AHR AIP	GNA13 AIP	HSP90AA1 AIP	STIP1 AIPL1	NUB1 AIRE	AIRE AIRE	CHD6 AIRE	DDX17 AIRE	DDX5 AIRE	EFTUD2 AIRE	GEMIN5 AIRE	HIST1H2AC AIRE	HIST1H2BO AIRE	HIST1H3A AIRE	HIST2H2BE AIRE	HSPA4 AIRE	HSPA5 AIRE	IPO7 AIRE	KPNB1 AIRE	LMNB1 AIRE	MCM2 AIRE	MCM5 AIRE	MCM6 AIRE	MSH2 AIRE	MSH6 AIRE	MYBBP1A AIRE	NASP AIRE	NOP56 AIRE	NUP93 AIRE	PABPC1 AIRE	PARP1 AIRE	PCNA AIRE	POLR2A AIRE	POLR2B AIRE	PRKDC AIRE	RAD21 AIRE	RANBP2 AIRE	RANBP9 AIRE	RUVBL2 AIRE	SMC1A AIRE	SMC3 AIRE	SNRPB AIRE	SNRPD3 AIRE	SRSF1 AIRE	SRSF2 AIRE	SRSF3 AIRE	SSRP1 AIRE	TOP2A AIRE	TRIM28 AIRE	XPO1 AIRE	XPOT AJAP1	CDH1 AJAP1	CTNNB1 AJUBA	PRMT5 AJUBA	RARA AJUBA	RARG AJUBA	RXRG AJUBA	SLC1A2 AJUBA	SNAI1 AK1	MLL3 AK4	KEAP1 AKAP1	AMY1A AKAP1	C3orf15 AKAP1	MYCBP AKAP1	PRKAR1A AKAP1	PRKAR1B AKAP1	PRKAR2A AKAP11	GSK3B AKAP11	PPP1CA AKAP11	PPP1CB AKAP11	PPP1CC AKAP11	PRKAR1A AKAP11	PRKAR2A AKAP11	PRKAR2B AKAP12	HDAC7 AKAP12	PRKAR2A AKAP12	PRKCA AKAP13	ESR1 AKAP13	GNA12 AKAP13	GNAQ AKAP13	PPARA AKAP13	RHOA AKAP13	RXRB AKAP13	THRA AKAP14	PRKAR2A AKAP17A	CCDC85B AKAP17A	NINL AKAP2	PRKAR2A AKAP3	AKAP4 AKAP3	PRKAR2A AKAP3	ROPN1 AKAP3	ROPN1L AKAP3	SPA17 AKAP4	AKAP3 AKAP4	FSIP1 AKAP4	FSIP2 AKAP4	PRKAR1A AKAP4	PRKAR2A AKAP5	CALM1 AKAP5	Dlg1 AKAP5	Dlg4 AKAP5	Gria1 AKAP5	Grin2b AKAP5	PPP3CA AKAP5	PRKAR2B AKAP5	PRKCA AKAP6	PDE4A AKAP8	AMY1A AKAP8	CCND1 AKAP8	CCND2 AKAP8	CCND3 AKAP8	DDX5 AKAP8	MCM2 AKAP8	PRKAR2A AKAP8L	CDC6 AKAP8L	EMD AKAP8L	LBR AKAP8L	RNF43 AKAP8L	TMPO AKAP8L	UBC AKAP9	CALM1 AKAP9	CALM2 AKAP9	CCNE1 AKAP9	CSNK1D AKAP9	CSNK1E AKAP9	FNBP1 AKAP9	PKN1 AKAP9	PRKAR2A AKAP9	TRIP10 AKAP9	TUBGCP3 AKIP1	NEDD8 AKIP1	PRKACA AKIP1	RELA AKIP1	SENP8 AKIP1	SIRT1 AKIRIN2	LNX1 AKR1A1	EXOSC4 AKR1B10	ACACA AKR1C2	AKR1C2 AKR1C3	LRIF1 AKR1C3	UBE2W AKR1C3	ZHX1 AKR7A2	AKR7A3 AKR7A3	AKR7A3 AKT1	ACTA1 AKT1	AKTIP AKT1	APOH AKT1	AR AKT1	ARFIP2 AKT1	ARHGAP29 AKT1	ARRB2 AKT1	ASXL1 AKT1	Akt2 AKT1	BAD AKT1	BPGM AKT1	BRAF AKT1	BRCA1 AKT1	CARHSP1 AKT1	CDC37 AKT1	CDKN1B AKT1	CHEK1 AKT1	CHN2 AKT1	CHUK AKT1	COMMD1 AKT1	CREBBP AKT1	DCTN1 AKT1	DNAJB1 AKT1	DNMT1 AKT1	EEF1G AKT1	EP300 AKT1	ERBB3 AKT1	ESR1 AKT1	EZH2 AKT1	FANCA AKT1	FOXO1 AKT1	GAB2 AKT1	GSK3A AKT1	GSK3B AKT1	HSP90AA1 AKT1	HSP90AB1 AKT1	HSPA4 AKT1	HSPB1 AKT1	IKBKB AKT1	ILK AKT1	IMPDH2 AKT1	IRAK1 AKT1	KRT10 AKT1	KTN1 AKT1	MAP2K4 AKT1	MAP3K8 AKT1	MAPK14 AKT1	MAPK8IP1 AKT1	MAPKAPK2 AKT1	MARK2 AKT1	MDM2 AKT1	MTCP1 AKT1	MTOR AKT1	MXD1 AKT1	NCOA4 AKT1	NCOR2 AKT1	NF2 AKT1	NOTCH1 AKT1	NPM1 AKT1	NR4A1 AKT1	PA2G4 AKT1	PAK1 AKT1	PAK6 AKT1	PDPK1 AKT1	PI4K2B AKT1	PIAS1 AKT1	PIAS2 AKT1	PKN2 AKT1	PPA1 AKT1	PPL AKT1	PPP2CA AKT1	RAF1 AKT1	SETDB1 AKT1	SKP2 AKT1	SMARCB1 AKT1	SMARCC1 AKT1	SMARCC2 AKT1	STUB1 AKT1	TCL1A AKT1	TCL1B AKT1	TERT AKT1	TRIB3 AKT1	TRIM13 AKT1	TSC1 AKT1	TSC2 AKT1	TTC3 AKT1	UBC AKT1	XIAP AKT1	YWHAZ AKT1	ZHX1 AKT2	APPL1 AKT2	CHEK1 AKT2	CHUK AKT2	ESR1 AKT2	MTCP1 AKT2	SETDB1 AKT2	SH3RF1 AKT2	TCL1A AKT2	TCL1B AKT2	TTC3 AKT2	XIAP AKT3	PRKCZ AKT3	TTC3 AKTIP	AKT1 AKTIP	ASS1 AKTIP	C10orf2 AKTIP	DCTN1 AKTIP	DZIP3 AKTIP	EXOC7 AKTIP	GTF3C1 AKTIP	HDLBP AKTIP	HOOK1 AKTIP	IARS AKTIP	IMMT AKTIP	KIAA1377 AKTIP	MARCH5 AKTIP	PDS5A AKTIP	POLA2 AKTIP	RPA1 AKTIP	TIMM50 AKTIP	TRIM23 AKTIP	TRIM41 AKTIP	UTP14A ALAS2	SUCLA2 ALB	FCGRT ALB	LUC7L2 ALCAM	CD6 ALDH1A1	ALDH1A1 ALDH2	C14orf1 ALDH2	C2orf18 ALDH2	CRMP1 ALDH2	HSPD1 ALDH2	HSPE1 ALDH2	IGSF21 ALDH2	UNC119 ALG10B	KCNH2 ALG2	ALG2 ALG2	ANXA11 ALG2	ANXA7 ALG2	HSP90AA1 ALG2	LAMP1 ALG2	PDCD6IP ALG2	SEC31A ALG2	TSG101 ALG2	VPS28 ALG2	VPS37A ALK	CDK13 ALK	CENPF ALK	DYT10 ALK	EIF4B ALK	EPHA1 ALK	EPHB2 ALK	GAK ALK	GRB2 ALK	HSPD1 ALK	IRF7 ALK	IRS4 ALK	JAK2 ALK	JAK3 ALK	KRT18 ALK	KRT74 ALK	MAP2K7 ALK	MAP3K1 ALK	MAP3K4 ALK	MAP3K5 ALK	MAPK1 ALK	MAPK8IP3 ALK	MEP1B ALK	MTIF2 ALK	MYBPC3 ALK	MYLK ALK	PDX1 ALK	PIK3CB ALK	PLCB2 ALK	PLCG1 ALK	PTN ALK	RAB35 ALK	RAD17 ALK	SHC1 ALK	SHC3 ALK	SMC6 ALK	SOCS1 ALK	SOCS5 ALK	STAT3 ALK	UBASH3A ALK	ZC3HC1 ALKBH1	DNAJB6 ALL1	CHD3 ALL1	HDAC1 ALL1	HDAC2 ALL1	HIST1H3A ALL1	MBD3 ALL1	RAN ALL1	RBBP4 ALL1	RBBP7 ALL1	SAP30 ALL1	SIN3A ALL1	SMARCA2 ALL1	SMARCB1 ALL1	SMARCC1 ALL1	SMARCC2 ALL1	TAF1 ALL1	TAF6 ALL1	TAF9 ALL1	TBP ALOX12	ITGB4 ALOX12	KRT5 ALOX12	LMNA ALOX12	TRIB1 ALOX5	COTL1 ALOX5	COTL1P1 ALOX5	TGFBRAP1 ALPI	AP3B1 ALPI	IRF5 ALS2CL	RAB5A ALX1	IPO13 ALX4	ALX4 AMBP	A2M AMBP	ALB AMBP	AMBP AMBP	CD79A AMBP	FN1 AMBRA1	ATG3 AMBRA1	ATG4B AMBRA1	CUL4A AMBRA1	CUL4B AMBRA1	DDA1 AMBRA1	DDB1 AMBRA1	MAP1B AMBRA1	PARK2 AMD1	AMD1 AMFR	AIFM1 AMFR	AMFR AMFR	ATP2A2 AMFR	ATXN3 AMFR	CANX AMFR	CCDC47 AMFR	CD3D AMFR	CRMP1 AMFR	CSE1L AMFR	CYP2E1 AMFR	CYP3A4 AMFR	DERL1 AMFR	DERL2 AMFR	DERL3 AMFR	EEF1A1 AMFR	ERLIN1 AMFR	ERLIN2 AMFR	FAF2 AMFR	HAX1 AMFR	HERPUD1 AMFR	HMGCR AMFR	HSP90B1 AMFR	HSPA4 AMFR	HSPA5 AMFR	HSPD1 AMFR	HTT AMFR	INSIG1 AMFR	KPNB1 AMFR	PDIA2 AMFR	RHOT1 AMFR	RNF5 AMFR	RPL5 AMFR	SEC61B AMFR	SOD1 AMFR	SRPRB AMFR	SYVN1 AMFR	TCP1 AMFR	TIMM50 AMFR	TMUB1 AMFR	TOM1L1 AMFR	TRIM28 AMFR	UBC AMFR	UBE2G2 AMFR	UFD1L AMFR	Ube2g2 AMFR	VCP AMIGO1	AMIGO1 AMIGO1	AMIGO2 AMIGO1	AMIGO3 AMIGO2	AMIGO1 AMIGO2	AMIGO2 AMIGO2	AMIGO3 AMIGO3	AMIGO1 AMIGO3	AMIGO2 AMIGO3	AMIGO3 AMOT	AMOTL1 AMOT	BAG3 AMOT	DLG1 AMOT	DYNLL1 AMOT	DYNLL2 AMOT	FOXK1 AMOT	FOXK2 AMOT	ITCH AMOT	LIN7A AMOT	LIN7C AMOT	LONP2 AMOT	MPDZ AMOT	MPP5 AMOT	MPP7 AMOT	NEDD4 AMOT	NEDD4L AMOT	NF2 AMOT	NIN AMOT	SCLT1 AMOT	UIMC1 AMOT	USP11 AMOT	YAP1 AMOTL2	AMOTL2 AMOTL2	GCC1 AMOTL2	KRT20 AMOTL2	MAGOHB AMPH	AP2B1 AMPH	BIN1 AMPH	CABIN1 AMPH	CDK5R1 AMPH	CLTC AMPH	DNM1 AMPH	FBP1 AMPH	ITSN1 AMPH	JUN AMPH	PLD1 AMPH	PLD2 AMPH	REPS1 AMPH	REPS2 AMPH	SGIP1 AMPH	SH3GL2 AMPH	SYNJ1 AMPH	SYNM AMPH	TP73 AMPH	TXNL4B AMPH	VTN AMPH	XRCC4 AMY1A	AKAP8 ANAPC1	ANAPC11 ANAPC1	ANAPC2 ANAPC1	ANAPC4 ANAPC1	ANAPC5 ANAPC1	ANAPC7 ANAPC1	CCNB1 ANAPC1	CDC16 ANAPC1	CDC23 ANAPC1	CDC27 ANAPC1	FZR1 ANAPC1	PTTG1 ANAPC10	CCNB1 ANAPC10	PTTG1 ANAPC10	SMAD2 ANAPC10	SMAD3 ANAPC11	ANAPC10 ANAPC11	ANAPC2 ANAPC11	CCNB1 ANAPC11	CUL5 ANAPC11	PTTG1 ANAPC11	UBC ANAPC11	UBE2L1 ANAPC13	CCNB1 ANAPC13	PTTG1 ANAPC16	CCNB1 ANAPC16	PTTG1 ANAPC2	ANAPC11 ANAPC2	ANAPC4 ANAPC2	ANAPC5 ANAPC2	BUB1B ANAPC2	CCNB1 ANAPC2	CDC20 ANAPC2	CREBBP ANAPC2	EP300 ANAPC2	EPHA4 ANAPC2	GRIA1 ANAPC2	MAD2L1 ANAPC2	PTTG1 ANAPC2	UBE2C ANAPC4	ANAPC1 ANAPC4	ANAPC10 ANAPC4	ANAPC11 ANAPC4	ANAPC5 ANAPC4	ANAPC7 ANAPC4	APC2 ANAPC4	BUB1B ANAPC4	BUB3 ANAPC4	C11orf51 ANAPC4	CCNB1 ANAPC4	CDC16 ANAPC4	CDC20 ANAPC4	CDC23 ANAPC4	CDC27 ANAPC4	FZR1 ANAPC4	MAD2L1 ANAPC4	PTTG1 ANAPC5	ANAPC7 ANAPC5	CCNB1 ANAPC5	CDC27 ANAPC5	FZR1 ANAPC5	PABPC1 ANAPC5	PTTG1 ANAPC5	ZBTB16 ANAPC7	CCNB1 ANAPC7	CDC20 ANAPC7	CREBBP ANAPC7	EP300 ANAPC7	FZR1 ANAPC7	PTTG1 ANGPTL4	ACTB ANGPTL7	ANGPTL7 ANK1	OBSCN ANK1	RHAG ANK1	TIAM1 ANK1	TTN ANK3	KCNC1 ANK3	SPTBN4 ANK3	TIAM1 ANKRA2	ABL1 ANKRA2	HDAC3 ANKRA2	HDAC4 ANKRA2	HDAC5 ANKRA2	LRP2 ANKRA2	MPL ANKRA2	PDE3B ANKRA2	RFX5 ANKRD1	MYPN ANKRD1	TTN ANKRD11	ANKRD11 ANKRD11	HDAC3 ANKRD11	NCOA2 ANKRD11	NCOA3 ANKRD12	HDAC3 ANKRD12	TADA3 ANKRD13B	RPLP1 ANKRD2	HBP1 ANKRD2	TCAP ANKRD2	YBX1 ANKRD2	ZBTB3 ANKRD23	MYPN ANKRD23	TTN ANKRD24	EEF1A1 ANKRD24	LRIF1 ANKRD24	UNC119 ANKRD32	RAD18 ANKRD55	ZSCAN1 ANKRD6	AXIN2 ANKRD6	CSNK1E ANKRD6	GSK3B ANKS1A	EPHA8 ANKS1B	UBC ANKZF1	VCP ANP32A	HIST1H3A ANP32A	MAP1B ANP32A	SET ANP32A	TAF1A ANP32A	XPO1 ANTXR2	UBC ANXA1	ANXA1 ANXA1	ANXA5 ANXA1	APBB1 ANXA1	C14orf1 ANXA1	C1orf123 ANXA1	CCT7 ANXA1	COPS6 ANXA1	CSAD ANXA1	FAF1 ANXA1	GAPDH ANXA1	KLHL23 ANXA1	KRT8 ANXA1	LRIF1 ANXA1	MLL4 ANXA1	OTUB1 ANXA1	RPA1 ANXA1	S100A11 ANXA1	SUMO1 ANXA1	UBC ANXA1	UBE2D1 ANXA1	UBE3A ANXA1	UNC119 ANXA1	XRCC6 ANXA11	ALG2 ANXA11	PDCD6 ANXA11	PLSCR1 ANXA11	S100A6 ANXA2	APOH ANXA2	CTSB ANXA2	PLAT ANXA2	S100A10 ANXA2	STAT6 ANXA2	gag ANXA3	IGSF21 ANXA3	TP53 ANXA3	UBR1 ANXA3	UNC119 ANXA4	NFKB1 ANXA4	NMT2 ANXA4	SMPD1 ANXA5	EED ANXA5	FDFT1 ANXA5	ITGB5 ANXA6	CDC73 ANXA6	Rasa1 ANXA6	S100A1 ANXA6	S100B ANXA7	A1BG ANXA7	A2M ANXA7	ACTB ANXA7	ACTL6B ANXA7	ADAMTS10 ANXA7	ALG2 ANXA7	ANGPT2 ANXA7	APLP1 ANXA7	ATP5B ANXA7	ATP6V1A ANXA7	ATXN3 ANXA7	BAG6 ANXA7	C14orf1 ANXA7	CCDC90B ANXA7	CCT7 ANXA7	CDK4 ANXA7	CELF3 ANXA7	CENPB ANXA7	CHGB ANXA7	CLEC3B ANXA7	COL11A2 ANXA7	COL4A2 ANXA7	COL4A5 ANXA7	COPS6 ANXA7	CPNE2 ANXA7	CPNE6 ANXA7	CPSF3L ANXA7	CRMP1 ANXA7	CSAD ANXA7	CTSB ANXA7	DDAH2 ANXA7	DMPK ANXA7	DOCK7 ANXA7	DVL1 ANXA7	DYNC1I1 ANXA7	EEF1A1 ANXA7	EXT2 ANXA7	F13A1 ANXA7	FAF1 ANXA7	FBN3 ANXA7	FGB ANXA7	FLAD1 ANXA7	GAPDH ANXA7	GBP2 ANXA7	GDF9 ANXA7	GNB2 ANXA7	GNB5 ANXA7	HADHB ANXA7	HMGXB3 ANXA7	HOXD8 ANXA7	INPP5K ANXA7	KLHL23 ANXA7	LRIF1 ANXA7	MED31 ANXA7	MLL4 ANXA7	MPPED1 ANXA7	MSH2 ANXA7	NGFR ANXA7	NMT2 ANXA7	NPRL2 ANXA7	OTUB1 ANXA7	PAAF1 ANXA7	PDHB ANXA7	PKM2 ANXA7	PLD3 ANXA7	PSMB10 ANXA7	QARS ANXA7	RBBP4 ANXA7	RBM48 ANXA7	RPA1 ANXA7	RPL13 ANXA7	RPS2 ANXA7	SDF4 ANXA7	SEMA5B ANXA7	SETDB1 ANXA7	SMPD1 ANXA7	SP110 ANXA7	SRI ANXA7	SUMO3 ANXA7	TAF5L ANXA7	TIAM2 ANXA7	TLE1 ANXA7	TMEM108 ANXA7	TMSB4X ANXA7	TP53 ANXA7	TRMT2A ANXA7	TUBA1A ANXA7	TUBB2B ANXA7	TUBB3 ANXA7	UBE2D1 ANXA7	UNC119 ANXA7	USP4 ANXA7	VIM ANXA7	WDR18 ANXA7	WDR73 ANXA7	ZBTB16 ANXA7	ZNF135 ANXA7	ZNF431 ANXA9	NEDD4 ANXA9	UBC AP1B1	AMPH AP1B1	AP1G1 AP1B1	AP1M1 AP1B1	AP2M1 AP1B1	ARF1 AP1B1	KIF13A AP1G1	AP1B1 AP1G1	AP1M1 AP1G1	AP1M2 AP1G1	AP1S1 AP1G1	AP2M1 AP1G1	AP2S1 AP1G1	ARF1 AP1G1	CLTC AP1G1	JUN AP1G1	NECAP1 AP1G1	NECAP2 AP1G1	RABEP1 AP1G1	SYNRG AP1G1	SYP AP1G1	gag AP1G2	NEDD4 AP1G2	SYNRG AP1M1	FXR2 AP1M1	LDOC1 AP1M1	RUNDC3A AP1M1	TIFA AP1M1	ZBTB8A AP1M2	EHD2 AP1M2	SCNN1A AP1M2	SCNN1B AP1M2	SCNN1G AP1S1	AP1G1 AP1S1	AP1G2 AP1S1	ARMC6 AP1S1	EBLN2 AP1S1	RAB10 AP1S1	SEC61A1 AP1S1	SLC16A1 AP1S2	AP1G1 AP1S2	AP1G2 AP2A1	RAB11FIP2 AP2A2	AMPH AP2A2	DAB2 AP2B1	AP1M1 AP2B1	AP1M2 AP2B1	AP2M1 AP2B1	ARRB2 AP2B1	ATP6V1G1 AP2B1	BUB1B AP2B1	DHX58 AP2B1	FAM46C AP2B1	KIAA0408 AP2B1	LDLRAP1 AP2B1	MEA1 AP2B1	MLH1 AP2B1	NECAP2 AP2B1	NUP54 AP2B1	POM121 AP2B1	RIBC2 AP2B1	TERF2IP AP2B1	THAP1 AP2B1	TUBGCP4 AP2M1	ADRA1B AP2M1	AQP4 AP2M1	CD22 AP2M1	CLEC4M AP2M1	CTLA4 AP2M1	DPPA2 AP2M1	DVL2 AP2M1	EHD2 AP2M1	FXR2 AP2M1	IKZF1 AP2M1	MED4 AP2M1	RTDR1 AP2M1	RUNDC3A AP2M1	TBC1D5 AP2M1	UBC AP2M1	ZBTB8A AP2S1	KHK AP2S1	POLQ AP3B1	ARF5 AP3B1	ARF6 AP3S1	IRS1 AP3S2	AP3B1 AP3S2	AP3D1 AP3S2	AP3M1 AP3S2	ARF1 AP3S2	ARF6 AP4B1	AP4E1 AP4B1	AP4M1 AP4E1	AP4B1 AP4E1	AP4S1 AP4M1	AP4B1 AP4M1	AP4E1 APAF1	APIP APAF1	BCL2L1 APAF1	CASP4 APAF1	CASP8 APAF1	CASP9 APAF1	HSP90AA1 APAF1	HSPA4 APAF1	NLRP1 APBA1	APP APBA1	CASK APBA1	CCS APBA2	APP APBA2	CLSTN1 APBA2	NECAB3 APBA2	RELA APBB1	ABI1 APBB1	APBB1 APBB1	APLP1 APBB1	APLP2 APBB1	APP APBB1	CCDC97 APBB1	CHERP APBB1	CPSF6 APBB1	CPSF7 APBB1	CYFIP1 APBB1	CYFIP2 APBB1	DDX17 APBB1	DDX3X APBB1	DDX46 APBB1	DHX15 APBB1	DHX9 APBB1	DIAPH1 APBB1	DIAPH2 APBB1	ENAH APBB1	EVL APBB1	HDAC1 APBB1	HNRNPH1 APBB1	HNRNPK APBB1	HTATSF1 APBB1	KAT5 APBB1	KHDRBS1 APBB1	KHSRP APBB1	LRP1 APBB1	NEDD4L APBB1	NEDD8 APBB1	NONO APBB1	Nedd4l APBB1	PABPC1 APBB1	PQBP1 APBB1	PTBP1 APBB1	RBM17 APBB1	RPL4 APBB1	SET APBB1	SF1 APBB1	SF3A1 APBB1	SF3A2 APBB1	SF3A3 APBB1	SF3B1 APBB1	SF3B2 APBB1	SF3B3 APBB1	SF3B4 APBB1	SFPQ APBB1	TFCP2 APBB1	THRAP3 APBB1	TSHZ3 APBB1	U2AF2 APBB1	VASP APBB1	WAS APBB1	WASF2 APBB1	WASL APBB1	WBP11 APBB1	WIPF1 APBB1	WIPF2 APBB1	YBX1 APBB1	YLPM1 APBB1	YWHAG APBB2	APP APBB3	APLP1 APBB3	APLP2 APBB3	APP APC	ACTN1 APC	AGFG1 APC	ANKRD17 APC	ANXA7 APC	AP2B1 APC	APC APC	AXIN1 APC	C4A APC	CGNL1 APC	COG4 APC	COG5 APC	CREBBP APC	CSNK2A1 APC	CSNK2B APC	CTBP1 APC	CTNNA1 APC	CTNNB1 APC	CYTH2 APC	DLG3 APC	DLGAP1 APC	DST APC	EPAS1 APC	ERBB2IP APC	EXPH5 APC	FAM214A APC	FBXO30 APC	FHOD1 APC	FLNA APC	GIGYF2 APC	GOLGA2 APC	HGS APC	HNRNPM APC	HSPA5 APC	ING5 APC	JUP APC	KIAA1328 APC	KIF5B APC	KIFAP3 APC	KRT13 APC	KRT14 APC	KRT15 APC	KRT17 APC	KRT19 APC	KRT23 APC	KRT5 APC	LAMA3 APC	LAMA4 APC	LPHN1 APC	MACF1 APC	MAPRE1 APC	MAPRE2 APC	MBD5 APC	MCM3AP APC	MUC1 APC	MYH10 APC	MYH11 APC	MYO6 APC	NAV1 APC	NAV2 APC	NAV3 APC	NCKAP5 APC	NCKAP5L APC	ND4 APC	NEB APC	NOSTRIN APC	NUP153 APC	NUP214 APC	NUP54 APC	NUP98 APC	NUPL1 APC	NUPL2 APC	PNISR APC	POM121 APC	POM121C APC	PPP1R13B APC	PPP2R5A APC	PSMD1 APC	PSMD4 APC	RANBP2 APC	RANBP9 APC	RBM4B APC	RPS27 APC	SEC31A APC	SETDB1 APC	SIAH1 APC	SMC3 APC	SNRNP200 APC	SPECC1L APC	SPTBN1 APC	SPTBN2 APC	SYNE1 APC	TAF1 APC	TFAP2A APC	TPR APC	TRIM21 APC	TUBA4A APC	UBC APC	XPO1 APC	ZFP106 APC	ZRANB1 APC11	UBE2D2 APC2	ACTA1 APC2	ANAPC1 APC2	ANAPC10 APC2	ANAPC11 APC2	ANAPC4 APC2	ANAPC5

Pushpendra · Accepted Answer

import pandas as pd
import numpy as np
import networkx as nx
df=pd.read_csv("human-ppi-h3imv25w.txt")
df=pd.DataFrame(np.array(df))
data_list=[]
for i in range(df.shape[0]):
    data=df.iloc[i][0].split('	')
    data_list.append(data)
nodes=[]
for i in range(len(data_list)):
    if(nodes.count(data_list[i][0])==0):
        nodes.append(data_list[i][0])
    if(nodes.count(data_list[i][1])==0):
        nodes.append(data_list[i][1])
edges={}
for i in range(len(nodes)):
    edges[nodes[i]]=[]
for i in range(len(data_list)):

Assignment 1 Assignment 5 • Write a script which can calculate the degree and clustering coefficient for every node (protein) in the human protein interaction network (attached). Now calculate the...

Answer To: Assignment 1 Assignment 5 • Write a script which can calculate the degree and clustering coefficient...

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